Shinji Ikari (Earth-616)/Affiliation

{| class="mw-collapsible mw-collapsed" style="width:100%" cellspacing="1" cellpadding="1" border="1" align="center"
 * colspan="2" style="text-align: left; left; background-color:white; color:black" | Affiliation

Affiliation
Dynasty of Primes/Imperial Family/House of We/Arcadia House/Ikari/Uzumaki House/Peverell family/Potter family/Evans family, Valyria Empire/Alternity Empire/Beyonders, Primus Industries/Corporation, Transformers Empire, Mithril, Amalgam, Dreamers/Ultimate Alliance/Knights of the Round Table/Illuminati/Council of Kings, FOXHOUND, Eternalty Force, Geass Order, The Order of the Black Knights, Longinus Dreizehn Orden, Ikari/Ayanami Corporation/Industries, Avalon Corporation/Beyond Corporation/Industries/Phoenix Fire Industries/Umbrella Corporation/Spiral Corporation International, Okami Corporation, Olympus Corporation, Old Ones/The Great Old Ones Empire/The Imperium, Asario Empire, Latverian Empire, SEES, Investigation Team, Shadow Operatives, Phantom Thieves of Hearts, Tokyo District Special Investigation Department, Avengers, X-Men, Fantastic Four, Future Foundation, Illuminati, Guardians of the Galaxy, Defenders, Inhuman Royal Family, The Gods of Japan, Asgardians, Gods of Olympus, Council of Godheads, Thor Corps, Parliament of Doom, Legion of Doom, Captain Britain Corps, S.H.I.E.L.D, Stark Enterprises, The Justice League, The Batman Family, Wayne Enterprises, The Teen Titans, The Young Justice, Superman Family, Superman Dynasty, Daily Planet, Green Lantern Corps, All Lantern Corps,All Pantheons of Gods from All Mythologies, New Gods, The Dark Knights, Legion of Doom, Endless, Teen Titans, Young Justice, Suicide Squad, LexCorp, Council of Immortals, Immortal Men, League of Assassins, League of Shadows, Anti-Living, Formerly NERV, WILLE, Rokobungi Family, Rokobungi Corporation TBA
 * }